CDS

Accession Number TCMCG051C35214
gbkey CDS
Protein Id XP_002317869.2
Location join(4260009..4260569,4260661..4261152,4261891..4262106,4262980..4263303,4263415..4263657,4264235..4264447)
Gene LOC7493488
GeneID 7493488
Organism Populus trichocarpa

Protein

Length 682aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002317833.3
Definition ERAD-associated E3 ubiquitin-protein ligase component HRD3A [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category MOT
Description Protein sel-1 homolog
KEGG_TC -
KEGG_Module M00403        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
KEGG_ko ko:K14026        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04141        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0000153        [VIEW IN EMBL-EBI]
GO:0000835        [VIEW IN EMBL-EBI]
GO:0000836        [VIEW IN EMBL-EBI]
GO:0000839        [VIEW IN EMBL-EBI]
GO:0002790        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006638        [VIEW IN EMBL-EBI]
GO:0006639        [VIEW IN EMBL-EBI]
GO:0006641        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006972        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009306        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0030433        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032940        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034976        [VIEW IN EMBL-EBI]
GO:0036503        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042538        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046486        [VIEW IN EMBL-EBI]
GO:0046903        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGAGACACAAACTCACACTCTCTCTTCTAATTTTCTCTCTCCTCCCACTCTCTCTCCTCGCCCGCCAGTACTTTCTCATCCTCTCTCAAGAAGACCTCAAAGACATCCCTTCCTCCCCAACCACTACCTCCTCCGATGTGGACCCCAATGAGTCTCCACCCGAGTGGGACGAGTTCGGCGACTCTGACTCCAAACCCGAACACGAACTCGACCCTGGCTCCTGGCGCCCGATCTTCGAACCCGACGCCACCACATCCTCCACCTCTGCATCGAAACTCGATCCGGAGATGGAGCAGTACTACTCCGCCGTGGAGAAGATGTTTTCGGCTGTGAGTGACAGTGAGGTTAAGGTTGTGGAGGAAGCAGTGGCGGAAATTGAGGAATTGGCGACGGTGAAGGGGAATTCCCATGCCCAATCGGTTTTAGGGTTTTTGTATGGATTAGGGCAAATTAAAGAGAGGGATAAAGCTAAGGCTTTTTTGTATCATCACTTTGCAGCCGATGGAGGCAGTTTGCAGTCTAAATCAGCTCTTGCCTACACGTATTACCGGCAGCAGATGTATGAAAATGCGGTTAAATTATATGCGGAATTAGCAGAAGTAGCAGTAAATAGTTTTTTGATTTCGAAGGATTCCCCGGTGATTGAACCGGTTAGGATACATAATGGGGCCGAGGAGAATAAAGAGGCTTTGAGGAAATCACGAGGGGAGGATGACGATGTGTTCCAGATTTTGGAATATCAAGCTCAAAAGGGGAATGCGGGAGCAATGTTTAAAATTGGGTATTTTCACTACTTTGGATTGAGAGGATTGAGGCGTGATCATGCCAAAGCTTTGGCATGGTTTTCAAAGGCTGTAGAGAAAGGGGAACCCAGGTCAATGGAACTTCTTGGTGAAATATATGCCCGGGGAGCTGGAGTTGAGAGGAACTATACTAAAGCGCTTGAATGGCTTACACTTGCTGCACAACAGCAGCTTTATTCGGCTTATAATGGCATGGGGTATTTGTATGTCAAGGGTTATGGAGTGCAAAAGAAGAACTACAGTAAAGCAAAAGAATACTTTGAGAGGGCTGCTGACCATGAAGATGCTGGTGGGCACTATAACCTTGGAGTAATGCATCTTAAAGGGATTGGAGTAAAGAGAGATGTACGTTTGGCATGCCAGTATTTTATAGTAGCTGCTAACGCAGGTCAACCAAAGGCATTTTACCAGCTGGCAAAGATGTTTCATATGGGGGTGGGGCTTAAAAAGAATCTTCTTATGGCTACTGCATTATACAAACTAGTAGCAGAACGGGGCCCGTGGAACTCCTTGTCTAGATGGGCATTGGAGTCATACCTAAAAGGTGATGTGGGCAAAGCATTCCTGTTGTATTCAAGGATGGCTGAGCTGGGCTATGAAATTGCACAAAGTAATGCTGCATGGATTCTTGACAAATATGCAGAGGGTAGCATGTGTATGGGGGAATCTGGGTTTTGTACAGACTCGGAAAGACACCAGCGTGCCCATTTTTTGTGGTGGCAAGCTTCAGAACAGGGCAATGAACATGCTGCTTTGCTTATTGGCGATGCGTATTACTATGGTAGGGGTACTGAGAGGGATTATGAACGAGCGGCAGAGGCTTACATGCATGCCAAATCGCAATCTAATGCGCAAGCTATGTTCAATCTTGGTTACATGCATGAACATGGTCAAGGACTTCCACTCGACCTTCATCTTGCTAAGCGTTACTATGACCAAGCTCTTGAGATCGATCCTGCAGCAAAGTTACCTGTCACACTAGCCCTCGCAAGCTTGTGGATAAGAAAGAACTATGCAGACAGTTTCATGGTACATGTAATTGATTCATTGCCTGGAGTCTATCCAAAAATCAAAGCATGGGTGGAGAATATTATCCTGGAAGAAGGAAACGCAGCAATACTTACTCTTTTTGTCTGTCTGCTTACGGTTCTCTATTTTCGTGAACGGCAACGAAGGAATGCTGCTGTTGAGGTTGGCATACAAGGCCAACATATCCATCATGCACCTGCTGCGCTCAATTAG
Protein:  
MQRHKLTLSLLIFSLLPLSLLARQYFLILSQEDLKDIPSSPTTTSSDVDPNESPPEWDEFGDSDSKPEHELDPGSWRPIFEPDATTSSTSASKLDPEMEQYYSAVEKMFSAVSDSEVKVVEEAVAEIEELATVKGNSHAQSVLGFLYGLGQIKERDKAKAFLYHHFAADGGSLQSKSALAYTYYRQQMYENAVKLYAELAEVAVNSFLISKDSPVIEPVRIHNGAEENKEALRKSRGEDDDVFQILEYQAQKGNAGAMFKIGYFHYFGLRGLRRDHAKALAWFSKAVEKGEPRSMELLGEIYARGAGVERNYTKALEWLTLAAQQQLYSAYNGMGYLYVKGYGVQKKNYSKAKEYFERAADHEDAGGHYNLGVMHLKGIGVKRDVRLACQYFIVAANAGQPKAFYQLAKMFHMGVGLKKNLLMATALYKLVAERGPWNSLSRWALESYLKGDVGKAFLLYSRMAELGYEIAQSNAAWILDKYAEGSMCMGESGFCTDSERHQRAHFLWWQASEQGNEHAALLIGDAYYYGRGTERDYERAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDPAAKLPVTLALASLWIRKNYADSFMVHVIDSLPGVYPKIKAWVENIILEEGNAAILTLFVCLLTVLYFRERQRRNAAVEVGIQGQHIHHAPAALN